The Second assumption in predicting RNA secondary structure is that the energy a

Question

The Second assumption in predicting RNA secondary structure is that the energy associated with any position in the structure is _____ influenced by local sequence and structure.

Options:

A . only

B . not at all

C . partially

D . never

Answer: Option A
Answer: (a).only

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Question 1. The third assumption in predicting RNA secondary structure is that the structure is assumed to be formed by _____ of the....the chain back on itself in a manner that ________

Question 2. Nussinov and Jacobson (1980) were the first to design a precise and efficient algorithm for predicting secondary structu....design a precise and efficient algorithm for predicting secondary structure.

Question 3. Martinez (1984) made a list of possible double-stranded regions, and these regions were then given weights in proportion....weights in proportion to their equilibrium constants, calculated by ______

Question 4. In 1971, first estimation of the energy associated with regions of secondary structure by extrapolation from studies wit....which configurations of larger molecules were the most energetically stable.

Question 5. A general theory for modeling strings of symbols, such as bases in DNA sequences, has been developed by linguists. There....so-called transformational grammars that deal with situations of increasing complexity.

Question 6. In a SCFG, each production of a non-terminal symbol has an associated probability for giving rise to the resulting produ....are a set of productions, each giving a different result.

Question 7. The application of SCFGs to RNA secondary structure analysis is very similar in form to the probabilistic covariance mod....is very similar in form to the probabilistic covariance models.

Question 8. ______ regions in sequences, such as those in RNA that will form secondary structures, are an example of such context-fr....form secondary structures, are an example of such context-free sequences.

Question 9. The use of SCFGs in RNA secondary structure production analysis is in fact very similar to that of the covariance model,....grammatical productions resembling the nodes in the ordered binary tree.

Question 10. One of the first methods used to find tRNA genes was to search for sequences that are complementary and can fold into a ....fold into a knot like the three found in tRNAs.

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