The initial alignments used to produce the guide tree may be obtained by various methods. Which of the following is not one of them? Options: A . &nbspFast k-tuple B . &nbsppattern-finding approach similar C . &nbspFASTA D . &nbspFaster, full dynamic programming method

The initial alignments used to produce the guide tree may be obtained by various

Question

The initial alignments used to produce the guide tree may be obtained by various methods. Which of the following is not one of them?

Options:

A . Fast k-tuple

B . pattern-finding approach similar

C . FASTA

D . Faster, full dynamic programming method

Answer: Option D
Answer: (d).Faster, full dynamic programming method

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Question 1. Like other alignment programs, CLUSTAL uses a null score for opening a gap in a sequence alignment and a penalty for ext....and a penalty for extending the gap by one residue.

Question 2. The scoring of gaps in a MSA (Multiple Sequence Alignment) has to be performed in a different manner from scoring gaps i....a different manner from scoring gaps in a pair-wise alignment.

Question 3. Which of the following is untrue about PILEUP program?....

Question 4. The resulting tree is then used to guide the alignment of the most closely related sequences and groups of sequences. Th....alignment is a global alignment produced by the Needleman-Wunsch algorithm.

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