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Question
A method of sequence alignment based on a Model (Bishop and Thompson 1986) was introduced that predicts the manner in which DNA sequences change during evolution. Which of the following is wrong about it?
Options:
A .  This method is different from the Smith-Waterman local alignment algorithm
B .  This method is quite similar to the Smith-Waterman local alignment algorithm
C .  The underlying mutational theory is like those used to produce the PAM matrices for predicting changes in DNA and protein sequences
D .  Sequences are predicted to change by a Markov process such that each mutation in the sequence is independent of previous mutations at that site or at other sites
Answer: Option B
Answer: (b).This method is quite similar to the Smith-Waterman local alignment algorithm

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