Which of the following is not true regarding the BLOCKS? Options: A . &nbspBlocks of width 10–55 are extracted from a protein MSA B . &nbspThe protein MSA is up to 400 sequences C . &nbspThe program doesn’t accept manually reformatted MSAs D . &nbspThe program accepts FASTA format

Which of the following is not true regarding the BLOCKS?

Question

Which of the following is not true regarding the BLOCKS?

Options:

A . Blocks of width 10–55 are extracted from a protein MSA

B . The protein MSA is up to 400 sequences

C . The program doesn’t accept manually reformatted MSAs

D . The program accepts FASTA format

Answer: Option C
Answer: (c).The program doesn’t accept manually reformatted MSAs

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Question 1. Although MOTIF program is used successfully for making the BLOCKS database, it is limited in the pattern sizes that can ....is limited in the pattern sizes that can be found.

Question 2. In the intermediate steps of EM algorithm, the number of each base in each column is determined and then converted to fr....in each column is determined and then converted to fractions.

Question 3. For the 10-residue DNA sequence example, there are _______ possible starting sites for a 20-residue-long site.....

Question 4. Which of the following about the Gibbs sampler is untrue?....

Question 5. An alternative method is to produce an odds scoring matrix calculated by dividing each base frequency by the background ....each base frequency by the background frequency of that base.

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Question 9. In the program DIALIGN, pairs of sequences are aligned to locate aligned regions that do not include gaps, much like con....gaps, much like continuous diagonals in a dot matrix plot.

Question 10. The Genetic Algorithm method has been recently adapted for MSA(Multiple Sequence Alignment) by Corpet (1998).....

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