The __________ refers to two single-stranded regions on opposite strands connecting two adjacent base-paired segments. Options: A . &nbsphairpin loop B . &nbspinterior loop C . &nbsppseudoknot loop D . &nbsphelical junctions

The __________ refers to two single-stranded regions on opposite strands connect

Question

The __________ refers to two single-stranded regions on opposite strands connecting two adjacent base-paired segments.

Options:

A . hairpin loop

B . interior loop

C . pseudoknot loop

D . helical junctions

Answer: Option B
Answer: (b).interior loop

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Question 1. The ______ refers to a structure with two ends of a single-stranded region (loop) connecting a base-paired region (stem)....of a single-stranded region (loop) connecting a base-paired region (stem).

Question 2. Four main subtypes of secondary structures can be identified. They are hairpin loops, bulge loops, interior loops, and m....are hairpin loops, bulge loops, interior loops, and multi-branch loops.

Question 3. The attractive interactions lead to _________ energy.....

Question 4. The scoring scheme based on the combined stabilizing and destabilizing interactions forms the foundation of the ab initi....foundation of the ab initio RNA secondary structure prediction method.

Question 5. The dot matrix method and the dynamic programming method can be used in detecting self-complementary regions of a sequen....can be used in detecting self-complementary regions of a sequence.

Question 6. If the base pair is adjacent to loops or bulges, the neighboring loops and bulges tend to ___________ the base-pair form....neighboring loops and bulges tend to ___________ the base-pair formation.

Question 7. Ab initio methods are energetically least favorable.....

Question 8. In ab initio methods for RNA structure prediction, the prediction results from RNAfold are not always guaranteed to be b....always guaranteed to be better than those predicted by Mfold.

Question 9. To distinguish the conserved secondary structure among multiple related RNA sequences, a concept of “covariation” is....multiple related RNA sequences, a concept of “covariation” is used.

Question 10. The comparative approach uses basic RNA structure based predictions to infer a consensus structure.....

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